Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHGTALEHRRVVSPYG--HRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRD--SMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGRQVDDRDWIARESTAVSLWGHDFTVGARG |
1KNF Chain:A ((1-284)) | -SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLF-RIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVT------VPAY--FLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFAFDRVDADGL-ITSTLGRHTNDHMVSFYASTPSGVEVEYGWSARTV-DRSWVVVRHDSPSMWGH-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148272 for 2316 contacts (-64.0/contact) +
2D Compatibility (PS) -30514 + (NN) -16885 + (LL) 328
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -223193.0 ( -96.37 by residue)
QMean score : 0.494
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