Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVREAGEVVAIVPAAGSGERLAVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILG-HRAMIVAGGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRDGYAAVVPVLPLSDTIKAVDANGVVLGTPERAGLRAVQTPQGFTTDLLLRSYQRGSLDLPAAEYTDDASLVEHIGGQVQVVDGDPLAFKITTKLDLLLAQAIVRG
2XWM Chain:A ((4-218))
--------VAVVPAAGSGERLRAGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALTDESKLVFGGEDSVIVSGGVDRTESVALAL---EAAGDAEFVLVHDAARALTPPALIARVVAALKEGHSAVVPGLAPADTIKAVDANGAVLGTPERAGLRAVQTPQGFHADVLRRAYARAT----AGGVTDDASLVEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL--
General information:
TITO was launched using:
RESULT:
Template:
2XWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146250 for 1775 contacts (-82.4/contact) +
2D Compatibility (PS) -23569 + (NN) -13493 + (LL) 1356
1D Compatibility (HY) -22400 + (ID) 6950
Total energy: -211306.0 ( -119.05 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_2XWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XWM-query.scw
PDB file :
Tito_Scwrl_2XWM.pdb
: