Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGL----GDALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPW--IA---VDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
4CRJ Chain:A ((4-147))
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLN-LCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILL-----YGEEMIDLPK----LSVPHPRMNERAFVLIPLNDIAANVVEPRSKLKV-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CRJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67827 for 1023 contacts (-66.3/contact) +
2D Compatibility (PS) -14200 + (NN) -4657 + (LL) 2604
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -99230.0 ( -97.00 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_4CRJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CRJ-query.scw
PDB file :
Tito_Scwrl_4CRJ.pdb
: