Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVARHRAQAAADLASLAAAARLPSGLAAACARATLVARAMRVEHAQCRVVDLDVVVTVEVAVAFAGVATATARAGPAKVPTTPG
1W85 Chain:I ((10-34))
-----------------------------MPSVRKYAREKGVDIRLVQGTGKNG------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1W85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6530 for 94 contacts (-69.5/contact) +
2D Compatibility (PS) -2542 + (NN) -281 + (LL) 5216
1D Compatibility (HY) 800 + (ID) 150
Total energy: -3487.0 ( -37.10 by residue)
QMean score : 0.155
(partial model without unconserved sides chains):
PDB file :
Tito_1W85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W85-query.scw
PDB file :
Tito_Scwrl_1W85.pdb
: