Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISFRPTADLVDDIGPDVRSCDLQFRQFGGRSQFAGPISTVRCFQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHGAVRDAAALRGIDIGIKALGTNPRKSTKTGAGERDVEITLGGVTFVPGDIAYSDDDGIIVV
1VI4 Chain:A ((6-153))
-------TPDLCDKYESQVTLLNLPLQNFGQRSAFWGEIVTVRCYHDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYGAVRDVVAMSEMDLGIKALGTSPFKTEKRGAGQVNVTLTMQNQIVEPGDYLYADWNGIL--
General information:
TITO was launched using:
RESULT:
Template:
1VI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40202 for 1143 contacts (-35.2/contact) +
2D Compatibility (PS) -15409 + (NN) -5350 + (LL) 372
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -67639.0 ( -59.18 by residue)
QMean score : 0.349
(partial model without unconserved sides chains):
PDB file :
Tito_1VI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VI4-query.scw
PDB file :
Tito_Scwrl_1VI4.pdb
: