Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
3K6L Chain:A ((2-165))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRL--
General information:
TITO was launched using:
RESULT:
Template:
3K6L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74136 for 1252 contacts (-59.2/contact) +
2D Compatibility (PS) -17573 + (NN) -5890 + (LL) 592
1D Compatibility (HY) -18800 + (ID) 4650
Total energy: -120457.0 ( -96.21 by residue)
QMean score : 0.758
(partial model without unconserved sides chains):
PDB file :
Tito_3K6L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K6L-query.scw
PDB file :
Tito_Scwrl_3K6L.pdb
: