Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAADFAADTPTYAHYLRNLGYRTALSGKMHFCGPD---------QLHGYEERLTS----DIYPADYGWAVNW----DEPEVRPSWYH-----NMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKP------------LPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDMLGERGLWYKMHWFEMAARVPLLVHAPAR--FAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSGH-------------DEVIGE----YTAEGTLSPLMMIRRGDYKFIYSEQDPCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP |
| 4UPH Chain:A ((45-502)) | ----PNVLLISADQWRGDCLSAVGHASV-KTPNVDALAQDGVLFTRHFAGTAP-SPARATLYTGLYQMNHRVCRNGSPLDARFDNLALAARRGGYDPTLFGYTD-TAPDPRGMDPNDPHLTTYEGVLPGFSARQLLPEHEKQWLSWLRSRGHPEATSRDIHIPVGATPGEISDVAPAYSKDET----QTAFLAGEFIRWLGEQDA--PWFAHVSFLRPHPPFSVPEPYNRMFTPSDGPAFARAANREAEQAVHPLLAFALPLIGKDSFIYGGEGSASDWTSEDLSAIRAIYYGMIAEVDTQLGRIWQALKNVGAWDDTLIIFTSDHAEMMGDHWMLGKGGFFDGSYHVPLVIRDPGHPGGAGRQVERFTSAADIFPTLCDRLG--LVPDNHLDGGTLVPFLEGGEPEGWRDAAFWEFDFRDIAKGEAERHFGLKSNACNLAVIRDERFKYVHFAGLPPLLYDLAKDPMELTNVAADADYAAVRLGYAEKLLSLRAQHLDQTLAYTELTEKGPVSRRP--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227921 for 3462 contacts (-65.8/contact) +
2D Compatibility (PS) -43134 + (NN) -24427 + (LL) 3836
1D Compatibility (HY) -18800 + (ID) 5800
Total energy: -316246.0 ( -91.35 by residue)
QMean score : 0.428
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