Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAALDAKLTAQVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPYGCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYIGLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTFPTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQK-PAEYDDPDATANANLAARLPYLFATCRFAHYLKCIVRDKIG---SFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEV--EG---NPGYYNSKFFLRPHYQLEGLTVSLRLVSKLPSAKEA |
| 3J2M Chain:U ((439-645)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNFNISSTYAAIDGNYKYQYDKYN--------------------DVNRWVPLAADIAGLCARTDNV-----------RG-QILNV-------------I--KLAIE--QAQRDRLYQEAINPVTGTGGD-GYVLYGDKTATSVPSP----------------NVRRLFNMLKTNIGRSSKYRLFELNNAFTRSSFRTETAQYLQGNKALG------GIY------EYRVVCDTTNNTPSVIDRNEFVATFYIQPARSINYITLNFVATA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61565 for 1167 contacts (-52.8/contact) +
2D Compatibility (PS) -19135 + (NN) -5689 + (LL) 20012
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -68877.0 ( -59.02 by residue)
QMean score : 0.372
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