Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPIEYIDRALALVVDRLARYPGYEVLLSAEKQLQYIRSVLLDRSLDRSALHRLTLGSIAVKEFDETDPELSRALKDAYYVGIRTGRGLKVDLP
3E98 Chain:A ((83-134))
----------------------------EMRHRLSQLMDVARENDRLFDKTRRLVLDLLDATSLEDVVSTVEDSLRHEFQ--------------
General information:
TITO was launched using:
RESULT:
Template:
3E98.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1226 for 245 contacts (5.0/contact) +
2D Compatibility (PS) -5605 + (NN) -2056 + (LL) 3260
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -4675.0 ( -19.08 by residue)
QMean score : 0.251
(partial model without unconserved sides chains):
PDB file :
Tito_3E98.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E98-query.scw
PDB file :
Tito_Scwrl_3E98.pdb
: