Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGATTALPARLDGVVIGVLLDVPDAAAPVVAYPGCPSEHGLAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLR-CGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
3UBO Chain:A ((219-259))
---------------------------------------------------------------------------------------QEALALYETE--DFDRALELLARDCKLAAVTLSEEGSVVVRGAERVRVGASVLEQVVDTTGAG
General information:
TITO was launched using:
RESULT:
Template:
3UBO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4215 for 206 contacts (-20.5/contact) +
2D Compatibility (PS) -4603 + (NN) -2031 + (LL) 6108
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -9641.0 ( -46.80 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_3UBO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UBO-query.scw
PDB file :
Tito_Scwrl_3UBO.pdb
: