Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
| 3EC0 Chain:A ((15-32)) | -----------------------------------------------------------------------------------------------IEG-QPVEVLLDTGADDSIVAGIELGNNYSPKIVGGIGGFINTKEYKNVEIEVLNKKVRATIMTGDTPINIFGRNILTALGMSLNL----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3327 for 51 contacts (-65.2/contact) +
2D Compatibility (PS) -1970 + (NN) -878 + (LL) 8632
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 957.0 ( 18.76 by residue)
QMean score : -0.071
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