Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRHPRVWMGFLLLSAISQANAAWTVNMAPGATEVSRSVFDLHMTIFWICVVIGVLVFGAMFWSM--IVHRRSTGQQPAHFHESTTVEILWTVVPFVILVVMAVPATRTLIHIYDTSEPELDVQVTGYQWKWQYKYLGQDVEYFSNLATPQDQIHNRQAKDEHYLLEVDEPLVLPVGTKVRFLITSSDVIHSWWVPAFAVKRDAIPGFVNEAWTKVDEPGIYRGQCAELCGKDHGFMPIVVDVKPKAEFDQWLAKRKEEAAKVKELTSKEWTKEELVARGDKVYHTICAACHQAEGQGMPP--MFPALK--------GSKIVTGPKEHHLEVVFNGV---PGTAMAAFGKQLNEVDLAAVITYERNAWGNDDGDMVTPKDVVAYKQKQQ
2YEV Chain:B ((19-320))----------------------AHRVAITHPGGSFNQEVAFLFPWVYFFSFLIFLVVAGSLAYVTWKFRARPEDQEEPPQIHGNDRLEVVWTLIPLAIVFVLFGLTAKALIQVNRPIPGAMKVEVTGYQFWWDFHY-------------PELGLRNSNE------------LVLPAGVPVELEITSKDVIHSFWVPGLAGKRDAIPGQTTRISFEPKEPGLYYGFCAELCGASHARMLFRVVVLPKEEFDRFVEAAKASPAPVAD------------ERGQQVFQQNCAACHGV-ARSMPPAVIGPELGLWGNRTSLGAGIVENTPENLKAWIRDPAGMKPGVKMPGF-PQLSEEDLDALVRYLEGLKVEGFDFGALPKF---------


General information:
TITO was launched using:
RESULT:

Template: 2YEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115366 for 1965 contacts (-58.7/contact) +
2D Compatibility (PS) -30220 + (NN) -9139 + (LL) 4916
1D Compatibility (HY) -24400 + (ID) 5200
Total energy: -179409.0 ( -91.30 by residue)
QMean score : 0.216

(partial model without unconserved sides chains):
PDB file : Tito_2YEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YEV-query.scw
PDB file : Tito_Scwrl_2YEV.pdb: