Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGRSQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGRE--ASRAGHALAAS-GEL--PADFANL-VRQDYPRLQRYGLDPALYDKA----G---------------GGERPLLWVVDPHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG |
| 2GGT Chain:A ((20-163)) | ---------------------------------------------------------------------DYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEA-IANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPYR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54814 for 822 contacts (-66.7/contact) +
2D Compatibility (PS) -12601 + (NN) -5202 + (LL) 4680
1D Compatibility (HY) -4400 + (ID) 650
Total energy: -72987.0 ( -88.79 by residue)
QMean score : 0.487
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