Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQ-EVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPA-DTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
2GVP Chain:A ((140-296))
------------------------------------------------------FSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMRPYR
General information:
TITO was launched using:
RESULT:
Template:
2GVP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69184 for 1058 contacts (-65.4/contact) +
2D Compatibility (PS) -16922 + (NN) -13209 + (LL) 5564
1D Compatibility (HY) -14000 + (ID) 2450
Total energy: -110201.0 ( -104.16 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_2GVP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GVP-query.scw
PDB file :
Tito_Scwrl_2GVP.pdb
: