Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLVLRDCFLGVRRFDDFERSL-GVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
4A5M Chain:A ((14-107))
----------CPVEFTLDVIGGKWKGILFYHMIDGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRTLEPIVLQMKEWGESNRD----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4A5M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69375 for 593 contacts (-117.0/contact) +
2D Compatibility (PS) -9820 + (NN) -1762 + (LL) 3996
1D Compatibility (HY) -7600 + (ID) 1350
Total energy: -85911.0 ( -144.88 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_4A5M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A5M-query.scw
PDB file :
Tito_Scwrl_4A5M.pdb
: