Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPANLGRLLPALCLGVLLSACSTFGQRDPLRIDLVGLEPLPGQGMEMRFMVKLRVQNPNDEPIEYNGIALDLDVNGQPLASGVSDQTGEVPRFGERVVSVPLTVSAFSAFRQAWGLSNNAPTQGMPYVVKGKLAGGL--F--GTVRFSEKGTLDFSGPAVGAPKTKGL
1XO8 Chain:A ((18-148))
---------------------------AIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGV---DWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDFF------
General information:
TITO was launched using:
RESULT:
Template:
1XO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26830 for 963 contacts (-27.9/contact) +
2D Compatibility (PS) -13535 + (NN) -5723 + (LL) 1868
1D Compatibility (HY) -6800 + (ID) 1000
Total energy: -52020.0 ( -54.02 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1XO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XO8-query.scw
PDB file :
Tito_Scwrl_1XO8.pdb
: