Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDAVPAGNFVPPLILHSDHGGSAMSSSAHRGRILHFLGDPAKLGDKAWEYFEDGLLWIEHGHVRALDHATYLLPQLPADLPLEEHPQRLLLPGFVDCHVHYPQL---GVIASYGTQLLDWLETHTFPAEQRFADAGYAAAQAELFLDELLRHGTTTALVFGTVHAVSAEAFF---QAAQKRR--LRMIAGKVLMDRNAPPALCDTAASGYAESRALIERWHGNGRLQYAVTPRFAPTSSPEQLAAAARLLDEYPGVYLHTHLSENLKEVAWVGELFPQAQDYLDVYHRAGLVGERSVFAHGIHLSERECRCLAHKNAALAHCPSSNLFIGSGLFDLGRAQQYGIRVGIGSD-VGGGTSLSLLANLADAYKIQQL---RGTSLDPFQALYLATLGGARALDLDGLVGNFLPGREADFVALDLAATPMIAQRMEHARGLADTLFVLNTLGDDRAVAETWVMGERRHVKG |
| 4DZH Chain:A ((67-423)) | --------------------------------------------------------------------------------------PDAALMPGLVNAHTHNPMTLLRGV--ADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTT---------CVNENYFFADVQAAVYKQHGFRALVGAVIID--FPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPH-APYTVNDANFERVRMLADQLDMPVHLHTHETAQEVA--DSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQADLVCVDLSA--LETQPLHH------VLSQLIYAAGRHQVTDVWIAGKPKLVQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155585 for 3108 contacts (-50.1/contact) +
2D Compatibility (PS) -37874 + (NN) -22948 + (LL) 6252
1D Compatibility (HY) -16400 + (ID) 5300
Total energy: -231855.0 ( -74.60 by residue)
QMean score : 0.478
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