Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
1YF0 Chain:A ((1-167))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFIHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPA-------------------
General information:
TITO was launched using:
RESULT:
Template:
1YF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96566 for 1273 contacts (-75.9/contact) +
2D Compatibility (PS) -18494 + (NN) -7782 + (LL) 1360
1D Compatibility (HY) -14800 + (ID) 4650
Total energy: -140932.0 ( -110.71 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_1YF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YF0-query.scw
PDB file :
Tito_Scwrl_1YF0.pdb
: