Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP
1YOE Chain:A ((16-318))-----------------------------------------ILLDCDPGHDDAIAIVLALASP-ELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIA-----ESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEP-VTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGA-MGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLE----KWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA


General information:
TITO was launched using:
RESULT:

Template: 1YOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173261 for 2727 contacts (-63.5/contact) +
2D Compatibility (PS) -32424 + (NN) -24114 + (LL) 3140
1D Compatibility (HY) -21600 + (ID) 6350
Total energy: -254609.0 ( -93.37 by residue)
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_1YOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YOE-query.scw
PDB file : Tito_Scwrl_1YOE.pdb: