Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
1HQD Chain:A ((220-272))
-----------------------------VFGVTGATDTSTIPL-------VDPANALDPSTLALFGTGTVMVNRGSGQNDGVVSKCSALYGQVLSTSYKWNHLDEINQLLGVRGANAEDPVAVIRTHANRLK
General information:
TITO was launched using:
RESULT:
Template:
1HQD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3703 for 305 contacts (12.1/contact) +
2D Compatibility (PS) -5152 + (NN) -1877 + (LL) 2976
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -3650.0 ( -11.97 by residue)
QMean score : 0.049
(partial model without unconserved sides chains):
PDB file :
Tito_1HQD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HQD-query.scw
PDB file :
Tito_Scwrl_1HQD.pdb
: