Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVVRRYPLALLLGMAGALADELPDGSLLQRYGVQADQLPTLAADPPSRKEEKETPSRFRVEPEQPLVTFGVKDHKGMEPTGNPSIDAMHERDRRICRNIRRQALEKGKAQPFDGYIECP
4GHC Chain:A ((247-311))
------------------------------RHGV-SNAFYLFILDPDNHRIEIYTQDYYTGDPDNPTITWNVHDNQRRDWWGNPVVPSWYTEASKVLDLDGNVQEIIERTDDSELEVTIG
General information:
TITO was launched using:
RESULT:
Template:
4GHC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 19091 for 309 contacts (61.8/contact) +
2D Compatibility (PS) -6791 + (NN) -3785 + (LL) 2508
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 7873.0 ( 25.48 by residue)
QMean score : 0.171
(partial model without unconserved sides chains):
PDB file :
Tito_4GHC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GHC-query.scw
PDB file :
Tito_Scwrl_4GHC.pdb
: