Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTDAKRPLQLNDQGQLRHFISLDGLPRELLTEILDTADSFLEVGARAVKKVPLLRGKTVCNVFFENSTRTRTTFELAAQRLSADVISLNVSTSSTSKGETLTDTLRNLEAMAADMFVVRHSDSGAAHFIAEHV-SPNVAVINGGDGRHAHPTQGMLDMLTIRRHKGNFEQLSVAIVGDILHSRVARSNMLALKTLGCPDIRVIAPRTLLPIGLEEQYGVRVFTNADEGLKDVDVVIMLRLQRERMQGGLLPSEGEFFKLYGLTEKRLKLAKPDAIVMHPGPINRGVEIESAVADGAQSVILNQVTYGIAIRMAVLSMAMSGQNTQRQLEQEDAE |
4BJH Chain:B ((32-322)) | ----------------MRSLISSLDLTREEVEEILKYAKEFKEGKEETIKASAVL-------FFSEPSTRTRLSFEKAARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPY--KEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAK-IGVCGPKTLIPRDV-EVFKVDVFDDVDKGIDWADVVIWLRLQKERQKENYIPSESSYFKQFGLTKERFEKVK---LYMHPGPVNRNVDIDHELVYTEKSLIQEQVKNGIPVRKAIYKFLWT-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BJH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -228128 for 2521 contacts (-90.5/contact) +
2D Compatibility (PS) -32170 + (NN) -15717 + (LL) 2036
1D Compatibility (HY) -24800 + (ID) 6050
Total energy: -304829.0 ( -120.92 by residue)
QMean score : 0.544
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