Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEAPELARGCEEGLFEKLDMAKVGDPADFVPGAV-QPCGVGI-----FVW-TTLLAYNPGKV-AGSPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYIHWWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEKQRLAMVW--SGGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQ-------NMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 1POT Chain:A ((23-322)) | ---------------------------------------------FTKETGIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWK-PEYKGSLLLTDDAREVFQMALRKLGYS-----GNTTDPKEIEAAYNELKKLMPNVAAFNS-DNPANPYMEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAASSIYEEYYQKLKAG------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1POT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73738 for 2273 contacts (-32.4/contact) +
2D Compatibility (PS) -30707 + (NN) -15899 + (LL) 4384
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -134810.0 ( -59.31 by residue)
QMean score : 0.356
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