Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRYALITGASSGIGLALAEALARRGRALILVARQRDALESIAYELAQRFGVEVLFRTCDLSEPLQLSGLLHELEQGERQIDLLVNNAGIGTSGPFI---DQEWAREQELIELNILALARLCHSLGARMAAQGGGQILNIASVAAFQPGAWMSNYYASKAYVLHFSEGLREELKERGVKVSVLCPGPTRTAFFREAGMRLGRLDRSKL----MMTPEEVALLALRGLDKNRALIVPGWRNRLLALSPRLAPRWLVRRLAARINASAVPSAPRG
2C07 Chain:A ((45-285))
--KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEI-KSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEW---EDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISS-----ISEQIKKNIISNIPAGRMGTPEEVANLACF-LSSDKSGYING---RVFVIDGGLSP----------------------
General information:
TITO was launched using:
RESULT:
Template:
2C07.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149862 for 1955 contacts (-76.7/contact) +
2D Compatibility (PS) -25432 + (NN) -17996 + (LL) 2904
1D Compatibility (HY) -16400 + (ID) 3500
Total energy: -210286.0 ( -107.56 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2C07.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C07-query.scw
PDB file :
Tito_Scwrl_2C07.pdb
: