Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIQHRTQDAIRTLTAAFAPFDCLIQATRKGNFSFTIVDQHGVACHSERLYPEQYDDSGKMEEVINRVRKKTLAA
3BID Chain:A ((9-49))
----------------------------AKGEYRWRLKAANHEIIAQ----GEGYTSKQNCQHAVDLLKSTTAAT
General information:
TITO was launched using:
RESULT:
Template:
3BID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 672 for 180 contacts (3.7/contact) +
2D Compatibility (PS) -4301 + (NN) -863 + (LL) 3176
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -3166.0 ( -17.59 by residue)
QMean score : 0.379
(partial model without unconserved sides chains):
PDB file :
Tito_3BID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BID-query.scw
PDB file :
Tito_Scwrl_3BID.pdb
: