Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLILTRRVGETLMVGDDVTVTVLGVKGNQVRIGVNAPKEVAVHREEIYQRIQKEKDQEPNH
1T3O Chain:A ((1-57))
MLVLSRKINEAIQIGADIEVKVIAVEGDQVKLGIDAPKHIDIHRKEIYLTIQEENNRAAAL
General information:
TITO was launched using:
RESULT:
Template:
1T3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24786 for 339 contacts (-73.1/contact) +
2D Compatibility (PS) -6351 + (NN) -2736 + (LL) 0
1D Compatibility (HY) -7600 + (ID) 1250
Total energy: -42723.0 ( -126.03 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_1T3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T3O-query.scw
PDB file :
Tito_Scwrl_1T3O.pdb
: