Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADREVGTVKWFNDAKGYGFIQRDSGPDVFVHYRAIRGEGHRSLVEGQKVEFSVIQGQKGLQAEDVSKV
1HZ9 Chain:A ((4-66))
------GKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQAVSFEIVQGNRGPQAANVVKL
General information:
TITO was launched using:
RESULT:
Template:
1HZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35387 for 405 contacts (-87.4/contact) +
2D Compatibility (PS) -6609 + (NN) -600 + (LL) 672
1D Compatibility (HY) -6400 + (ID) 1800
Total energy: -50124.0 ( -123.76 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1HZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HZ9-query.scw
PDB file :
Tito_Scwrl_1HZ9.pdb
: