Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADG-IRFWVPVNGSHTRNSEFPRSELRETLS-SGRPYNWRYARADNWLEATLRIEAVPSTRRMIIGQIHSDGSNSGQAAPLVKLLYQLRLDQGRVQALVRERPDDGGTRAYTLMDGIPLGQPFSYRIGVSRSGLLSVSVNGSALEQQL---DPQWAYQGLYFKAGLYLQDNRGPSSEGGRAT--FSELRVSHQ
2ZAC Chain:A ((10-226))
--DLSHWKLQLPDAN-TTEISSANLGLGYTSQYFYTDTDGAMTFWAPTTGGTTANSSYPRSELREMLDPSNSKVNWGW-QGTHTMKLSGKTVQLPSSGKIIVAQIHGIMDDGTNAPPLVKAVFQ----DGQLDMQVKQNSDGTGSDVHNYFTGIKLGDLYNMEIRVT-DGVAYVTMNGDTRSVDFVGKDAGWKNLKYYFKAGNFVQDN---TSTGGSAIAKLYSLSVSHS
General information:
TITO was launched using:
RESULT:
Template:
2ZAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99977 for 1692 contacts (-59.1/contact) +
2D Compatibility (PS) -21883 + (NN) -6518 + (LL) 336
1D Compatibility (HY) -15200 + (ID) 3850
Total energy: -147092.0 ( -86.93 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_2ZAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZAC-query.scw
PDB file :
Tito_Scwrl_2ZAC.pdb
: