Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
1M8P Chain:A ((423-470))
--------------------------------------------------------QGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRIAFVATELTRAGAAVIAAPIAP
General information:
TITO was launched using:
RESULT:
Template:
1M8P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3459 for 240 contacts (-14.4/contact) +
2D Compatibility (PS) -4768 + (NN) 2251 + (LL) 3484
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -4392.0 ( -18.30 by residue)
QMean score : -0.009
(partial model without unconserved sides chains):
PDB file :
Tito_1M8P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M8P-query.scw
PDB file :
Tito_Scwrl_1M8P.pdb
: