Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCELLGMSANVPTDIVFSFTGLMQRGGGTGPHRDGWGIAFYEGRGVRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-----KPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISACDEYRKKGVFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEPLTDNENWTLQQSGEWVLWWGGEVLAKGRV |
1JXA Chain:A ((29-125)) | ---------------------------------DSAGLAVVDAEGHMTRLRRLGKVQM-LAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSE----HIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16585 for 583 contacts (-28.4/contact) +
2D Compatibility (PS) -9725 + (NN) -5122 + (LL) 1340
1D Compatibility (HY) 800 + (ID) 1450
Total energy: -30742.0 ( -52.73 by residue)
QMean score : 0.243
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