Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMHPRRLLAVLGVVVLTSMTSCTSFSSSRSSSMDKTGWITHCFGRFLIDLPPDAVINAGYYLWGDRIEYLDDKPTELAARVDRLEQEWRTQRHKSKGNMFLRKIDFGNESVGLLSWSSEVASKTYLLDTYVTSKPTWHVYRWKGKVSVDREQHAVEISRALARNLRSRAPKEIPSEPGFCIDHAYIAGDSFQVERFGVGVTFPEHPGARFEFRSSTGAELNSLLERVDGFVQNMLSTFAGMETLRKGKHPVGSLPGEEYLVAGSDKGQRGYTFMWEVQGKEESLTEPNLTAGLAVLERSNENGKPPPPAFKSDKEALELWDTIVDSIRVRPTSSSPRGGNAGPSPAP--KPATPGGQTLGDHYVYEEFLSSLKP-------KDSWLDDL |
| 2VJN Chain:A ((249-304)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSVPRGGNAGGAGQPGWMLKCKGWETDADSYVYFTIAANMWPQICDMIDKPEWKDDP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3798 for 168 contacts (22.6/contact) +
2D Compatibility (PS) -5349 + (NN) -5601 + (LL) 19552
1D Compatibility (HY) -1200 + (ID) 1000
Total energy: 10200.0 ( 60.71 by residue)
QMean score : 0.428
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