Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAELGIFNGHLLQHLLAALWFLFCWVGYTRYATWKGRDTACLASVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFASSTLIILAGILTLLGSTDRAVSVLADLPFVEEASRGLSELKLLCLAVVFVYAFFTFSWCMRQYNFAAILVGSAPMIGERNVGELERKSFAERAARVISLAANQFNFGLRSYYFGLAMLAWFINSWFFMLVTAGVVLVLYRREFHSDVLEVMVYTETAIAESPREGEGEVPRG |
1O8W Chain:A ((8-40)) | ------------------------------------------------------------------------------------------------------------LPGIEKLRRGDGEVEVKSLAGKLVFFYFSASWCPPCRGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTTRARATLVKDPEGEQFPWKDA-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5257 for 112 contacts (-46.9/contact) +
2D Compatibility (PS) -3212 + (NN) 2143 + (LL) 10240
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 1264.0 ( 11.29 by residue)
QMean score : -0.051
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