Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAELFAVMAPVLFGAGVGYVWVRLGHAYPTEFVSRIVFNIGSPCLILATLAHTRVDLHSFGRMALASALICVCMAALGWAAARLGRQEWQVLVPAYSFPNVGNMGLPVCLYAFGEAGMTLAVAFYLIMSIGNFSLGVFWMSGERSWRSLLGNPILLSVLLALLLMGLDLQLPRWMANTVDLMA-GLTIPLM-LITLGVSLASIR-PR-QLGNGFFYGGLRLLLGALVGWSVALA---LQLP---P-LAQGVLVVQSSM--PVAVFNYLYALRG-NR----SPDQVASLVLCSTLLSFAFIPLLLTWWLPALR |
| 1ZCD Chain:A ((250-380)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60376 for 671 contacts (-90.0/contact) +
2D Compatibility (PS) -11466 + (NN) -877 + (LL) 15216
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -63903.0 ( -95.24 by residue)
QMean score : 0.010
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