Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIACLDLEGVLV-PEIWIAFAEKTGIDALKATTRDIP-----DYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD---SDRVVGYQLRQKDPKRQSVIAFKSLYYR-------VIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLSL
3P96 Chain:A ((191-384))
------DVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATL--AGLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTLTGRVVGPIID----RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNA-KPALREVADASLSHPYLDTVLFLLGVTRGEIEA
General information:
TITO was launched using:
RESULT:
Template:
3P96.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81134 for 1426 contacts (-56.9/contact) +
2D Compatibility (PS) -19160 + (NN) -7674 + (LL) 748
1D Compatibility (HY) -5200 + (ID) 2750
Total energy: -115170.0 ( -80.76 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_3P96.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P96-query.scw
PDB file :
Tito_Scwrl_3P96.pdb
: