Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLHTNHGVITLKLDEEKAPETAANFKEYVKSGHYDNTVFHRVINNFMIQGGGFEPGMKQKPTRAPIKNEANNGLTNKVGSIAMARTMDPHSASAQFFINVADNDFLNHTAPTTQGWGYAVFGEVVEGMDVVNKIKGVATTMRSGHQDVPAEDVIIEKAEIVEE
1CLH Chain:A ((7-165))
-VLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDH---GQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSAKVLP-
General information:
TITO was launched using:
RESULT:
Template:
1CLH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53147 for 1246 contacts (-42.7/contact) +
2D Compatibility (PS) -16872 + (NN) -8803 + (LL) 368
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -97704.0 ( -78.41 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1CLH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CLH-query.scw
PDB file :
Tito_Scwrl_1CLH.pdb
: