Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAAFYLASLKIPGLSLTGANFAGAPLFVIGHNQRIAWGYTNTGSHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFDFGHDWVLPYRYDRIREWLGGPGQRTLEDSLEL----QNDEFSSVMASLLPKMLEQVSD---PELRASEAFALLQGWN---HQAAADLAAP--LIAGYWVRAFTRELLQPRIGTQLLASGWNQRNYDGFLRLILDGQADLRFWCGQEQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHAALAEHVPFHKTPLRALFDLKNNKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMVIDLADFDNSRYALSTRNSGLPFDGATDLNELWARGAYIRIADDAPDATDRQLVLRPSASSSGEPRP |
| 3ML0 Chain:B ((1-359)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNLWSTRPERVQEGSTVLINGPQFGWYNPAYTYGIGLHGAGFDVVGNTPFAYPIVLFGTNSEIAWGATAGPQDVVDIYQEKLNPSRADQYWFNNAWRTMEQRKERIQVRGQADREMTIWRTVHGPVMQFDYDQGAAYSKKR-------SWDGYEV--QSLLAWLNVAKARNWTEFLDQASKMAISI-NWYYADKHGNIGYVSPAFLPQRPADQDIR--VPAKG-DGSMEWLGIKSFDAIPKAYNPPQGYLVNWNNKPAPDKTNTD-TYYWTYG---DRMNELVSQYQQKDLFSVQEIWEFNQKASYSDVNWRYFRPHLEKLAQQLPADDSSKAALTMLLAWDGMEQDQGGQNAGPARVLFKTWLEEMYKQVLMPVVPESHRAMYSQTGFATQQGPNPGSINLSMGTKVLLRALVLEAHPDPKRVNVFGERSSQEIMHTALQNAQARLSQEQGAQMARWTMPTSVHRFSDKNFTGTPQTMPGNTFAFTGYQNRGTENNRVVFDAKGVEFCDAMPPGQSGFTDRNGVRSPHYEDQLKLYENFECKTMDVTHADIRRNAQSSTMLLIQPQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ML0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52940 for 2359 contacts (-22.4/contact) +
2D Compatibility (PS) -36780 + (NN) -18296 + (LL) 17460
1D Compatibility (HY) -22000 + (ID) 5000
Total energy: -117556.0 ( -49.83 by residue)
QMean score : 0.241
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