Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLDTTALHLGFYLAN----WGMF--RGSSGLLQNSNLDLMKALARQLFSGAGPELFELSLVDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGEFPALDRHYVAACRALYPRRGLTSVNGGTLTALHRLIGEERLSFPRLETARKGLLYPTGRLADMAFFQYGLENA |
3J2J Chain:A ((87-154)) | -------------------PGGPIPA-KVDDYAWQTSTNPSIFWTEGNAPARMSIPFISIGNAYSNFYDGWSNFDQRGSYGYNTLNNLGHIYVRHVSGSSPHPITSTIRVYFKPKHTRAWVPRPPRLCQYKKAFSVDFTPTPITDTRKDINTVTTV---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J2J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4797 for 223 contacts (21.5/contact) +
2D Compatibility (PS) -5953 + (NN) 3048 + (LL) 7216
1D Compatibility (HY) -800 + (ID) 1000
Total energy: 7308.0 ( 32.77 by residue)
QMean score : -0.149
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