Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHE-VAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
2Z9C Chain:A ((2-194))
-KVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDG-ELVGALR---APLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTP-YLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA-
General information:
TITO was launched using:
RESULT:
Template:
2Z9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108634 for 1417 contacts (-76.7/contact) +
2D Compatibility (PS) -21375 + (NN) -11471 + (LL) 464
1D Compatibility (HY) -17600 + (ID) 4200
Total energy: -162816.0 ( -114.90 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_2Z9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z9C-query.scw
PDB file :
Tito_Scwrl_2Z9C.pdb
: