Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDRLYTWAGLWRSPSSSWEALRLEDDQAESQLRAPDERSGLPYQLDYRLRWDADWHLREAVFHVESETGVRKLHLLADGRGHWQDGDGEALPAFDGCLDIDIWPSPFTNTFPIRRLGLADGQRAEIRALYIEAPALEPR-SMRQAYTRLDASHYL--YENLEGSAFKAVLLVDEQGLVIDYPGLFQRL |
4D26 Chain:A ((249-327)) | ----------------------------------------------------------------------------------------------------DIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTKYEKRNSLKQLIEENDGKRILVFVETKRNADFIAAMLSEQQLLTSSIHGDRMQR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D26.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1247 for 299 contacts (-4.2/contact) +
2D Compatibility (PS) -7860 + (NN) 466 + (LL) 5836
1D Compatibility (HY) -6400 + (ID) 1000
Total energy: -10205.0 ( -34.13 by residue)
QMean score : -0.080
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