Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCRNCGER--PASEGHICMVCKRRSDIDPYKALIAMALLVYCGVSLAAYLKPHMPAPPPTAGSSVQPAEELAQRARQATLEQRGI
1LKO Chain:A ((156-180))
-WRCRNCGYVHEGTGAPELCPACAHPKAHFELLGINW--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LKO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1914 for 100 contacts (-19.1/contact) +
2D Compatibility (PS) -2203 + (NN) 1728 + (LL) 3476
1D Compatibility (HY) -1600 + (ID) 400
Total energy: -913.0 ( -9.13 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_1LKO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LKO-query.scw
PDB file :
Tito_Scwrl_1LKO.pdb
: