Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGSGHEATSTPPRRSHWRWLRRLLTLAFFVLVPVLLFLLVKNLDWQEVRHALGEYRPATLFLGLLLAAAGYTVFSSFDLLSRYYIGHSLPKRRVFTVAFVCNAFNLNLSSWVGAVALRYRLYSRLGLDIADITRILTFSLVTNWFGYLLLAGILFSCGLPALPPGWKLGSDGLRLIGALLLALAAGYLLACRFARRRAWGWREHRLTLPSWRLAALQGLLGASNWSLMALLLYSLLPHSVDYPSVLAILLISSIAGVITHIPAGLG----------VLEAVFIALLQGRLSQGVLLAALIGYRVLYFLLPLALACVVYLLLERRAIRLRRKQRRLRQGQA |
4AQ9 Chain:C ((237-304)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLISFLAALAFYLPAESGEKMSTAICVLLAQAVFLLLTSQRLPETALAVPLIG-KYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHSGIDSTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AQ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39126 for 283 contacts (-138.3/contact) +
2D Compatibility (PS) -6064 + (NN) -1128 + (LL) 19888
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -34730.0 ( -122.72 by residue)
QMean score : 0.115
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