Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYRPQDIFFRSSAPVTIDEDRCIADKGC--TVCVEVCPMDLLAIDPTTRKAYMAY-DECWYCMPCEKDCPTGAVKVEIPYLLR
2FJB Chain:B ((2-64))
--------------PSFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPDMCWECYSCVKMCPQGAIDV-------
General information:
TITO was launched using:
RESULT:
Template:
2FJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47168 for 404 contacts (-116.8/contact) +
2D Compatibility (PS) -6140 + (NN) -4130 + (LL) 1816
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -60822.0 ( -150.55 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_2FJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FJB-query.scw
PDB file :
Tito_Scwrl_2FJB.pdb
: