Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRTDNVIDFARYRSRRQARRLGEMMWAVYAWRAGYAVPQPPARHDERSRRA
2OO6 Chain:A ((174-194))
----------------------------LHAWRPGFAVPFQPALNVDR----
General information:
TITO was launched using:
RESULT:
Template:
2OO6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -453 for 65 contacts (-7.0/contact) +
2D Compatibility (PS) -2000 + (NN) -1801 + (LL) 2792
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -3162.0 ( -48.65 by residue)
QMean score : 0.047
(partial model without unconserved sides chains):
PDB file :
Tito_2OO6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OO6-query.scw
PDB file :
Tito_Scwrl_2OO6.pdb
: