Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDAFSEEGSAQPRHDAQRPALAPRSDGFDIHTYHPDFVADPYPLLRLIRSRAPVCR---DQASIWWISRYADVSACLRDRRFSADPARLGAAGVRQGGASW---FGHQQLQPLARFYDNFMLFNDAPRHTRLRRLFAPAFGPDAVRRWEARIEVLVEELLDSLLERREPDLLRDFAEPLTIRVAAELFGFPREDTGQLLPWGRDLAAGLDLAASHGDAGQINRSAVAFSDYLQRQARGWSDGSSRPPSGAAPSILDGAAMLEAGLGLEDLVAAYAMVFMAAFETTISMVGNATLALLTHPDQLDLLRRCPELAANAVEELLRFDGAV-RGGVRCTLEEVEIGGQRIPPGEKVWLSFLAANRDPEMFAAPDRLQLQRANAKQHVAFAHGPHYCLGAYLARLELQCALRGLV--RRRFALASEPTDLRWRRSSVFRTLERLPIVPEGDAQKTCE |
| 3A50 Chain:A ((18-397)) | -------------------------------------FWQNPHPAYAALRAEDPVRKLALPDGPVWLLTRYADVREAFVDPRLSKD---------------WRHRLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGLPAEDRDDFSAWSSVL---VDDSPADDKNAAMGKLHGYLSDLLERK-------RTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITR-DASGGVFFGHGIHFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRRSTLVRGLSRMPVT---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -251645 for 3004 contacts (-83.8/contact) +
2D Compatibility (PS) -39876 + (NN) -20488 + (LL) 2028
1D Compatibility (HY) -32000 + (ID) 6950
Total energy: -348931.0 ( -116.16 by residue)
QMean score : 0.495
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