Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVKISQTADVQRFFEEASGQLNERGDPRTKALVRRILDDTAKLIEEMQVTPDEFWKAVDYLNRLGSRQEAGLLAAGLGLEHYLDLLLDAQDAEAGLTGGTPRTIEGPLYVAGAPLSDGEARMDDGRDA-GTVMFLQGRVSGPDGQPLAGAIVDVWHANTQGTYSYFDSS--QSEYNLRRRIRTDADGRYRARSIVPSGYGCPSDGPTQELLDRLGRHGQRPAHIHFFVSAPGHRHLTTQINLAGDRYLWDDFAYATRDGLIGDLRFNDDPAAARDRGVEGGRFAELDFDFQLQASPAPAAERRSQRPRALQG
1DMH Chain:A ((3-308))--VKIFNTQDVQDFLRVASGLEQEGGNPRVKQIIHRVLSDLYKAIEDLNITSDEYWAGVAYLNQLGANQEAGLLSPGLGFDHYLDMRMDAEDAALGIENATPRTIEGPLYVAGAPESVGYARMDDGSDPNGHTLILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYFVSADGHRKLTTQINVAGDPYTYDDFAYATREGLVVDAVEHTDPEAIKANDVE-GPFAEMVFDLKLTRLVDGVDNQVVDRPR----


General information:
TITO was launched using:
RESULT:

Template: 1DMH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43637 for 2242 contacts (-19.5/contact) +
2D Compatibility (PS) -33223 + (NN) -19876 + (LL) 356
1D Compatibility (HY) -24800 + (ID) 8550
Total energy: -129730.0 ( -57.86 by residue)
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_1DMH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DMH-query.scw
PDB file : Tito_Scwrl_1DMH.pdb: