Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSILRLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQDDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVSFVWGPGQITPVHDHR-VWGLIGMLRGAEYSQPYAF-DAGGRPHPSGARRRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANIGAVRRAVFSAEGEEKPFISGYSNSRLPNIWDLSKENPA
4UBG Chain:A ((51-157))
----------------------------------------------------AKFDQYRYTRNLVD-QGNGKFNLMILCWGEGHGSSIHDHTDSHGFLKLLQGNLKETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIG-LHRVENVSHTEPAVSLHLY------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UBG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22097 for 689 contacts (-32.1/contact) +
2D Compatibility (PS) -11545 + (NN) -9148 + (LL) 5944
1D Compatibility (HY) -8000 + (ID) 1300
Total energy: -46146.0 ( -66.98 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_4UBG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UBG-query.scw
PDB file :
Tito_Scwrl_4UBG.pdb
: