Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAIPLEHGLALASVLFALGLVGLMVRRNILFVLMSLEVMMNAAALAFVVAGSRWGQPDGQVMFILVLSLAA--AEASIGLAILLQLYRRFHTLDIDAASEMRG
4A95 Chain:A ((328-384))
-----------------------LLAKRNNFDVFNALEVMQNKS----VFEDLKFGEGDGSLKYYLYNWKCASFAPAHVGIVLL--------------------
General information:
TITO was launched using:
RESULT:
Template:
4A95.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16567 for 226 contacts (-73.3/contact) +
2D Compatibility (PS) -5195 + (NN) 6892 + (LL) 4260
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -16360.0 ( -72.39 by residue)
QMean score : -0.228
(partial model without unconserved sides chains):
PDB file :
Tito_4A95.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A95-query.scw
PDB file :
Tito_Scwrl_4A95.pdb
: