Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDIDG---EEVRRNYSLSAASNGREYRISVKREAGGRVSNYLHDRVAEGDELDLFPPAGDFVLRDS-DKPLVLITAGVGITPALAMLQEALPQA---RPIRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGDSA----DAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA
1GVH Chain:A ((1-396))MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFS---PGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQ-YSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAML-DTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAF-SDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL--


General information:
TITO was launched using:
RESULT:

Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -246904 for 3095 contacts (-79.8/contact) +
2D Compatibility (PS) -41083 + (NN) -13403 + (LL) 396
1D Compatibility (HY) -33200 + (ID) 8300
Total energy: -342494.0 ( -110.66 by residue)
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_1GVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVH-query.scw
PDB file : Tito_Scwrl_1GVH.pdb: