Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLFDTLTLPNGSTIPNRLAKA---AMEENMADAAQAPSERLMRLYQAWADGGAGLLISGNVMVDSRAMTGPGGVVLED-----DAQLEKFRRWARIGRSAGAQFWLQINHPGRQMQANLGQQAWAPSAVPLELGGMSRHFATPKAMDEAMIAEVIQRFARSAGLAERAGFSGVEIHAAHGYLLSQFLSPLSNRRSDAWGGSLENRARLLLEIVRAVRAEVAPGFAVAVKLNSADFQRGGFSADDAREVVRMLDGLGVDLVELSGGSYEAPAMQGEARDGRTLAREAYFVEFARDIRAAARMPVMVTGGIRRRPVAEQVLASG-VDMVGIGTALAIEPNLPRDWRAGKDSAPQLRPITWRNKPLASLANMAAVKFQLRKLSRGRATNPRVSPLCALLAQQAGALLQTRRYRRLMRSRAEA |
| 1Z41 Chain:A ((4-318)) | -KLFTPITIKD-MTLKNRIVMSPMCMYSSHEKDGKLTPFHMAH--YISRAIGQVGLII-----VEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRK--AELEGDIFAPSAIAFD-----EQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVK-QVWDG-PLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADIN---------VFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFAR------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167538 for 2671 contacts (-62.7/contact) +
2D Compatibility (PS) -32794 + (NN) -15198 + (LL) 7376
1D Compatibility (HY) -20000 + (ID) 5250
Total energy: -233404.0 ( -87.38 by residue)
QMean score : 0.534
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