Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGGSDGRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVH------------KFTLARGGADYNFAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWG--EGSTIYSGNTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNVT--AQNGDSTDILVAPSLSYIYSEGGTPHVVLLYTNRTTHFCYYRTILLAKAVAGSSGWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 4X4A Chain:A ((232-401)) | -----------------------------------------------------------------------------------------------VFPTTYLAMKYSDDEGETWSDLQIVSTFKPEESKFLVLGPGVGKQIANGEH---AGRLIVPLYSKSSA--ELGFMYSDDHGNNWTYVEADQNTGGATAEAQIVEMP--DGSLKTYLRTGSGY---IAQVMSTDGGETWSERVPLTEIATTGYGTQLSV---INYSQPVDGKPAILLSAPNATN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4X4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -27887 for 1055 contacts (-26.4/contact) +
2D Compatibility (PS) -17618 + (NN) -14050 + (LL) 13968
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -54087.0 ( -51.27 by residue)
QMean score : 0.371
|
|
|